Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme541942g00001 CTTAAGTGTGTGATTTTGGAAGGGTTGAGGCGTCATCCACCGGGGCATTTTGTGTTGCCACACGCGGTGACTGAGGATGTTGTTTTGGATGGTTATTTGGTGCCCAAAAATGGGACTGTGAATTTTATGGTGGCTGAGATGGGGTGGGATCTTCGTGTTTGGGAGGATCCAATGGAGTTTAAGCCAGAGAGGTTTTTGAAGGATGAAACATTTGATATTACAGGGAGTAAAGAGATAAAGATGATGCCGTTTGGAGCTGGGAGGAGAATTTGT 273 0.4542 LKCVILEGLRRHPPGHFVLPHAVTEDVVLDGYLVPKNGTVNFMVAEMGWDLRVWEDPMEFKPERFLKDETFDITGSKEIKMMPFGAGRRIC 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme541942g00001 91 PRINTS E-class P450 group I signature 2 20 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme541942g00001 91 PRINTS E-class P450 group I signature 81 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme541942g00001 91 PRINTS E-class P450 group I signature 43 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme541942g00001 91 SUPERFAMILY Cytochrome P450 1 91 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme541942g00001 91 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 91 - -
Trme541942g00001 91 Gene3D Cytochrome P450 1 91 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme541942g00001 91 Pfam Cytochrome P450 1 91 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme541942g00001 Trme-Chr541942 1 273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme541942g00001 1 91 Cytochrome P450 AT1G64950 75.824 8.99e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme541942g00001 K24184 - gmx:100792037 175.637