Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54167g00001 ATGAATCCTCATTGGGAGAAGTGTCCGTATTTTGTTTATAAGATGTTGTTTGACCTGAAGAAACCTTCTCATCCTACTCGTGGAGTTCCAACTGCTATCAATTGCCTATCAACTCTACTTAAGGAACCTGTAGTTAGGTCTTCCTTTGTTCAAGCTGATGGGGTCAAGTTGCTTGTGCCACTGATTTGTCCAGCATCCACTCAACAATCTATTCAG 216 0.4167 MNPHWEKCPYFVYKMLFDLKKPSHPTRGVPTAINCLSTLLKEPVVRSSFVQADGVKLLVPLICPASTQQSIQ 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54167g00001 72 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 14 72 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54167g00001 Trme-Chr54167 25 343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54167g00001 19 72 Primary Pumps ATPases(2) AT3G42050 90.741 1.29e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54167g00001 K02144 - egr:104414045 103.219