Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54107g00001 ATGAGGGTTGGAAGCAACTCCGATGAAGCAACCAAGAGAATGAGGCGTCAATCTCGGTCCAAAACTTTTAAGATTGAGATTACTTATTTAGCGAAAATTCCATTACAAGAGATTGCAAATGTAGTACAAGGTCAAGAATCCGAGCATCATCAAGAAGTATTGAATGTTCTAGACGTAATATTGAGCCAGAATGCAACAAAGCAGGGGTGTCTCCGTATTCGCCAATCATACTTTCATGATAATCCAAGAAATATTTCTAATATCGATGGTGGTGTTCAATGTTGTCGCGGTTTCCATTCCAGCTTCAAAGTCACACAAAAGGGTTTATCTCTCAATGTTG 340 0.3912 MRVGSNSDEATKRMRRQSRSKTFKIEITYLAKIPLQEIANVVQGQESEHHQEVLNVLDVILSQNATKQGCLRIRQSYFHDNPRNISNIDGGVQCCRGFHSSFKVTQKGLSLNV 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54107g00001 113 SMART DUF1785_2 71 113 IPR014811 -
Trme54107g00001 113 Pfam Argonaute linker 1 domain 73 113 IPR014811 -
Trme54107g00001 113 Pfam N-terminal domain of argonaute 8 61 IPR032474 -
Trme54107g00001 113 SUPERFAMILY PAZ domain 21 113 IPR036085 GO:0005515
Trme54107g00001 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 10 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54107g00001 Trme-Chr54107 36 669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54107g00001 17 113 Eukaryotic Initiation Factors Gene Family AT1G48410 30.612 8.82e-12 58.5