Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme540978g00001 GAGGAAGTGAAGAGGATGGTGGAGGATTATAGGAAGGAGGTGGTGAGGGTGGGAGGAGAGAAATTGAGGGTGGGGGAAGTGGCTGCGGTGGCCGGGAGGATGGCCGCGGTGGAGCTAAATGAGGAGGCAAGGGTTAGAGTTAAGGAGAGTAGTGAATGGGTGATGGAGAGTGTTCATAAGGGTACTGATTGTTATGGTGTCACTACTGGCTTTGGTTCAACCTCTCATAGAAGAACTACTCAAGGTCATGCCCTTCAAACTGAGCTTATTAGG 273 0.5092 EEVKRMVEDYRKEVVRVGGEKLRVGEVAAVAGRMAAVELNEEARVRVKESSEWVMESVHKGTDCYGVTTGFGSTSHRRTTQGHALQTELIR 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme540978g00001 91 MobiDBLite consensus disorder prediction 70 91 - -
Trme540978g00001 91 Pfam Aromatic amino acid lyase 22 91 IPR001106 -
Trme540978g00001 91 SUPERFAMILY L-aspartase-like 2 91 IPR008948 GO:0003824
Trme540978g00001 91 Gene3D - 1 91 IPR024083 -
Trme540978g00001 91 PANTHER HISTIDINE AMMONIA-LYASE 1 91 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme540978g00001 Trme-Chr540978 2 274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme540978g00001 1 91 Monolignol Biosynthesis Gene Families AT3G10340 69.892 1.95e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme540978g00001 K10775 - tpra:123898450 177.948