Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54060g00001 GACTTTGATATTCTCTTGACATCACTGGATTCACGCGGGATCAGGGAATCTCATTTGCGCTTAATGTTGCAAAAGATYGAGAAATCCTTTAAAGAAAATGTTCGAAAAAATACACAATATGCAAAAATCGGAAGCATAGGGGAAGGCTCTATTAAAATTGAAGCTAATGAAAAATTTCCAATGCCTGAGCGCCATTCAGGATCTGACAGTCCTAGCAGTACCCTTCATGACTTGAACTCTGGTACATCGGAAACTTCATCATCCTTCAAAATTGAGCTTTGGGAAAGTGAGAACGAAAAGAAAGCTGCATTGAGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAATTCATCAATTTTATGTGCAATGAAATTTGGGCACGTTTCCGTCAAATAA 408 0.3775 DFDILLTSLDSRGIRESHLRLMLQKIEKSFKENVRKNTQYAKIGSIGEGSIKIEANEKFPMPERHSGSDSPSSTLHDLNSGTSETSSSFKIELWESENEKKAALRRYQDFQKWMWKECYNSSILCAMKFGHVSVK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54060g00001 135 MobiDBLite consensus disorder prediction 66 89 - -
Trme54060g00001 135 MobiDBLite consensus disorder prediction 54 89 - -
Trme54060g00001 135 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 2 131 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54060g00001 Trme-Chr54060 258 754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54060g00001 2 130 Homeobox Transcription Factor Family AT1G28420 44.697 3.08e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54060g00001 - - psat:127081735 213.001