Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54046g00001 AGTTACCTCAAGACCCATGATTTCTTGCGGCCACTAGAACAAGTAGAAACGAAATCCGATACCAAGGAAGAAGCCACTGATGAAATCTCATCCGTGGTTCAGAAGCAACCGCCTTTAGCAACACCAGCTTCAGTTGAGCACATCTTACCTGGAGGAATTGGGACTTACAGTATCAGCCACATTAATTCCTACGTCAATAATAATCAAAGGATTCCAAAGCCAGAAGCATCACTTTTCACTGTGCATCAAGCAACCAGTGCAGATAGAAACGATGACAACTCCAATTGCAGTTCACATACGTCAAGCGGTTTCACATTGTGGGAAGAGTCTGACATTAAAAAGGGAAAGACAGGGAAAGAGAATAATGTTGGCGAGAAGCCCATTATAGGAG 391 0.4348 SYLKTHDFLRPLEQVETKSDTKEEATDEISSVVQKQPPLATPASVEHILPGGIGTYSISHINSYVNNNQRIPKPEASLFTVHQATSADRNDDNSNCSSHTSSGFTLWEESDIKKGKTGKENNVGEKPIIG 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54046g00001 130 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 3 118 IPR044295 GO:0003700|GO:0006351|GO:0046983
Trme54046g00001 130 MobiDBLite consensus disorder prediction 14 43 - -
Trme54046g00001 130 MobiDBLite consensus disorder prediction 84 104 - -
Trme54046g00001 130 MobiDBLite consensus disorder prediction 111 130 - -
Trme54046g00001 130 MobiDBLite consensus disorder prediction 14 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54046g00001 1 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 50.758 1.91e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54046g00001 - - gmx:100800999 187.193