Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53973g00001 AAGAATTCCTTTTTATGGGGAGGTACAACACCAAATGTTATCATCACAGACCCTGAGCATATTAAGCAAGTCTTTAACAAGATTGAGGACTTCCCCAAACCAAAGCTAACATCCATTGGCAAGTATTTGAGCAATGGTCTTGTAAATTATGAGGGTGAGAAATGGGCTAAACATCGAAAGATCGTCAATCCTGCATTTCACATAGAAAAATTGAAAGGTATGTTTCCTGCATTTTTTCACAGTTGCAATGAAATGATAAGCAAATGGAAGGGATTGTTGTCACCAGATGGAACATGTGAGATTGATGTTTGGCCTTTCCTTCAGAATTTGACCTGTGATGCAATTTCTAGAACAGCATTTGGAAGCAGCTATGAAGAAGGCACAAAAATATTTGAACTTCTGAA 404 0.3762 KNSFLWGGTTPNVIITDPEHIKQVFNKIEDFPKPKLTSIGKYLSNGLVNYEGEKWAKHRKIVNPAFHIEKLKGMFPAFFHSCNEMISKWKGLLSPDGTCEIDVWPFLQNLTCDAISRTAFGSSYEEGTKIFELL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53973g00001 134 Pfam Cytochrome P450 5 126 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme53973g00001 134 PRINTS Group II E-class P450 signature 109 127 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme53973g00001 134 PRINTS Group II E-class P450 signature 52 72 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme53973g00001 134 SUPERFAMILY Cytochrome P450 4 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme53973g00001 134 Gene3D Cytochrome P450 3 133 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme53973g00001 134 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme53973g00001 Trme-Chr53973 1 499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme53973g00001 1 133 Cytochrome P450 AT3G14620 60.448 4.27e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme53973g00001 - K17873 ag:BAL45207 240.35