Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53908g00001 ATGGACAAGATAGAATTGGTTCCCATTGATCTACAAGACAGGCCTTCCTGGTATAAGGACAAAGTCTACCCAGCCAACAAGGTTCCATCTCTAGAACACAATAATGAAGTTAGAGGAGAAAGTCTTGATCTGATTAAATATATTGACACTCACTTTGAAGGCCCCTCCCTTTTCCCTACCGTTCCTGATGATAAGGAGTTTGCTGAAGAGTTGATATCTTACACGGATACCTTCAACAAGACCGTCGTTTCTTCATTTAAAGGAGATGTGACCGAGGCCG 280 0.425 MDKIELVPIDLQDRPSWYKDKVYPANKVPSLEHNNEVRGESLDLIKYIDTHFEGPSLFPTVPDDKEFAEELISYTDTFNKTVVSSFKGDVTEA 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53908g00001 93 Gene3D - 54 93 - -
Trme53908g00001 93 Pfam Glutathione S-transferase, N-terminal domain 4 55 IPR004045 -
Trme53908g00001 93 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 92 IPR044629 GO:0004364
Trme53908g00001 93 Gene3D Glutaredoxin 1 53 - -
Trme53908g00001 93 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 56 IPR004045 -
Trme53908g00001 93 SUPERFAMILY Thioredoxin-like 4 57 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme53908g00001 Trme-Chr53908 104 656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme53908g00001 2 93 Glutathione S-transferase Gene Family AT3G55040 66.304 3.90e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme53908g00001 K00799 - qsu:112015804 164.851