Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme538g00002 ATGTCGACGACNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNTCAACTCCGTTTCTACCAAATTCCAGCGGCTCCTCCGACGAAATCAACTCCGGTCGTCGAATTGTTCGTCGACAGAGACTTCTCCAAGCGGCGAGATTTCTCCGGCAAGCAAGCGGACGGCGAATGATGCGTGAACCGTCGGTTGTTGTTAGAGAAACAGCGGCGGAGCAATTAGAAGAAAGACAAAGCGATTGGGCGTATTCGAAACCTGTTGTGATTCTTGATATCGTTTGGATCTTCGCTTTCGTTGTTGTGGCTGCGACTGCTTTCTTTCTGAGTAGGAATGAGTCGCCGGAGATGCCTTTAAGGTTGTGGATTGCGGGTTACGTTCTGCAATGTGTTCTTCATATGGTTTGTGTTTGTTTTGAGTATAGAAGACGGAGAAGCTTTCAACGGTCTTCTTCTTCGAATGCAGTAGCAGGTTCTGACAGAGTTAGTGGTGTAAGCAGTGGGAATTTGAGTTCTGCTTCCAGAGAAGCTTCTCGTTCTGGTTCGAGTTATGTTTCATTGGCTCAATTTGGTGAAGAGGGTACTAGGTGA 591 0.4416 MSTTXXXXXXXXXXXXXSTPFLPNSSGSSDEINSGRRIVRRQRLLQAARFLRQASGRRMMREPSVVVRETAAEQLEERQSDWAYSKPVVILDIVWIFAFVVVAATAFFLSRNESPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRSFQRSSSSNAVAGSDRVSGVSSGNLSSASREASRSGSSYVSLAQFGEEGTR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme538g00002 196 PANTHER TARGET OF ERK KINASE MPK-1 55 155 - -
Trme538g00002 196 MobiDBLite consensus disorder prediction 1 32 - -
Trme538g00002 196 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme538g00002 Trme-Chr538 3192 3782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme538g00002 18 185 C3H Transcription Factor Family AT1G68070 40.116 1.19e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme538g00002 - - gmx:100790497 205.297