Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme538449g00001 ATGGCCAGTGATATCATCTCCAATGGCTACTTGACATCAGTTCTTGTACCCTATGGAGAACAATGGAAAAAGATGAAGAAAATCATTGCTAACGATTTACTTTCTCCGCTCAAACATCAATGGCTTCAAGACAAAAGGAACGAAGAAGCTGATAATCTTATGTTTTACTTGCACAACAAATGCAATAATGGTGGCCTTGTGAATATTAGAATTGCTACACAACATTATTGTG 232 0.3664 MASDIISNGYLTSVLVPYGEQWKKMKKIIANDLLSPLKHQWLQDKRNEEADNLMFYLHNKCNNGGLVNIRIATQHYC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme538449g00001 77 SUPERFAMILY Cytochrome P450 9 73 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme538449g00001 77 Gene3D Cytochrome P450 2 77 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme538449g00001 Trme-Chr538449 18 249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme538449g00001 2 77 Cytochrome P450 AT2G22330 47.368 2.48e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme538449g00001 - K14984 gmx:100787378 123.635