Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53745g00001 ATGAGACCAGATGATATCTCCCGTTTTCATCAAGTTCTTGAGGCAAGGATGAGAGAAGCCAACAGAAACAGCAATGTAAGGAATCTTGTTATTGACGTTCAAATGGTGCAGAGAAGGAGCATTATGTACTATCAACAATTAGAGTCCCAACCATTTCTCAAAATTATTGTTGCACTCCCAACAATGGTTGCTAGCTGCCGTGGTATACTTGATAGAGGTATTCAGCTTGATGGTCTTGGCATGAAAAGCTTCATGACTTATGAAAGCAATGTACTTTTTGCTCTTCGTTTCATGATTGATTGCAACATAGTTGGCGGAAATTGGATTGAAATTCCTGTTGGAAAATATAAGAAGACAACAAAAAACTTGTCTTACTGCCAGTTAGAGTTTGATTGCCT 398 0.3844 MRPDDISRFHQVLEARMREANRNSNVRNLVIDVQMVQRRSIMYYQQLESQPFLKIIVALPTMVASCRGILDRGIQLDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEIPVGKYKKTTKNLSYCQLEFDCL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53745g00001 133 Gene3D DNA Polymerase, chain B, domain 1 1 124 - -
Trme53745g00001 133 SUPERFAMILY Ribonuclease H-like 27 132 IPR012337 -
Trme53745g00001 133 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 3 132 - -
Trme53745g00001 133 Pfam DNA polymerase family B, exonuclease domain 19 132 IPR006133 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme53745g00001 1 133 Core DNA Replication Machinery Family AT5G63960 74.436 1.07e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme53745g00001 K02327 - gmx:100817379 236.498