Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5372g00001 ATGAACTTGCAGGTATTTTTTCTRTGCTTGATTGCAGGCTGCAGCATCTGCTGGTTCAACACCATCTGCTATGTATTATGTATAAAAAATTTCACATCTAACCGTTCACTTGCRTTATCTTTAAGCATTAGTTTCAATGGTGTAAGTGCAGCTTTATACACTCTCATTGCAAATGCAATAATATCAAACAATGACACTCTCTATCTCTTCCTCAATGCCATTGTTCCTCTCCTCATTTCAGCATTAGTACTCATTCCAATTCTCCAACAACCACAGCCTCAGCAACAACATTCTGCCGACACACTTCATCGTAGCGATCATGATTCCTTAATTTTTCTTTGCCTCAACATCCTTGCCCTTGTCACAGGCCTCTACCTTCTCTGCCTATATTCTCTTTCCTCGTCCCCAACCGTAGCTCGTGTTATCCTTGTCGGTGCGATTTTTCTCCTATCAATGCTTTTATTTTTGCCAAGCATTGTGTATTCAAAACAATGGTCTTGTTTCACTCTTCCGACGAGCTTTTCGTTATATGAATCAAGTTTCGCTGTTATTGAAAATAATGATGATGATGATCATGAGCTTCACAAAGAACTAATTAGTATAGAGGATCATGATGCAAGGAGTAATGGAAGTGTACAAAGCATGATGATTGAGAAGAGTTTATGTTTTATGAATGTGTTGGAGAAAGAGAAGATTATGATGCTTGGTGAAGAACATACAACTAAGATGTTGATTCGTAG 740 0.3811 MNLQVFFLCLIAGCSICWFNTICYVLCIKNFTSNRSLALSLSISFNGVSAALYTLIANAIISNNDTLYLFLNAIVPLLISALVLIPILQQPQPQQQHSADTLHRSDHDSLIFLCLNILALVTGLYLLCLYSLSSSPTVARVILVGAIFLLSMLLFLPSIVYSKQWSCFTLPTSFSLYESSFAVIENNDDDDHELHKELISIEDHDARSNGSVQSMMIEKSLCFMNVLEKEKIMMLGEEHTTKMLIR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5372g00001 246 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 243 - -
Trme5372g00001 246 Pfam Nodulin-like 4 160 IPR010658 -
Trme5372g00001 246 SUPERFAMILY MFS general substrate transporter 4 137 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5372g00001 Trme-Chr5372 38 777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5372g00001 3 245 Nodulin-like Gene Family AT4G19450 44.574 4.74e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5372g00001 - - gmx:100804951 283.493