Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53622g00001 CATGAAATTGTTGGTGTGGTGACAAAAATTGGAAACAATGTGAAAAATTTCAAAGTGGGGGATAAGGTTGGTGTTGGTGTGATGGTGGAGTCTTGTCAGACTTGTGAGAATTGCCAGCAGGATCTAGAGAATTACTGTCCTAAACTTGTATTCACCTATAACTCTCCTTATAATGGGACACGAACCTATGGCGGCTATTCTGATTTCGTGGTTGTTCACCAGCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNAGGCAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAATTTGGTAAAGCATTTGGGCTGAAGGTTACTGTCATTAGTACCTCTCCAAACAAGAAAAGTGAGGCCATTGACAAACTTGGTGCTGATTCTTTCATTGTTTCCAAAGACCCTGAACAAATGAAGGTAAGTAAGATACAAAACTATTAA 534 0.3277 HEIVGVVTKIGNNVKNFKVGDKVGVGVMVESCQTCENCQQDLENYCPKLVFTYNSPYNGTRTYGGYSDFVVVHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKKSEAIDKLGADSFIVSKDPEQMKVSKIQNY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53622g00001 177 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 108 170 IPR036291 -
Trme53622g00001 177 Gene3D - 105 176 - -
Trme53622g00001 177 PANTHER ALDEHYDE REDUCTASE 1 171 IPR047109 GO:0016616
Trme53622g00001 177 Gene3D - 1 79 - -
Trme53622g00001 177 SUPERFAMILY GroES-like 1 75 IPR011032 -
Trme53622g00001 177 Pfam Alcohol dehydrogenase GroES-like domain 1 75 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme53622g00001 Trme-Chr53622 350 883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme53622g00001 1 172 Monolignol Biosynthesis Gene Families AT4G39330 53.179 2.99e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme53622g00001 K00083 - gmx:100795575 181.415