Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53616g00001 ATTCGTAGTAGCTCTCACAAAGGGCTCAGTGTGCCAGATGCAAGCCTTGTCCCTGTGTCGTCAACTATTGATGTTATTGAACTAATGAACCTTGGCCACAGGAACCGTGCTGTTGGAGCAACAGCCCTTAACGACCGCAGTAGCCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTACCATCCGCGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGGGTAGATAAGTCTGAGGCCACTGGAGATAGACTAAAAGAGGCACA 293 0.4812 IRSSSHKGLSVPDASLVPVSSTIDVIELMNLGHRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGATIRGCMHLVDLAGSERVDKSEATGDRLKEA 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53616g00001 97 PRINTS Kinesin heavy chain signature 41 58 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme53616g00001 97 PRINTS Kinesin heavy chain signature 72 90 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme53616g00001 97 Pfam Kinesin motor domain 1 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme53616g00001 97 ProSiteProfiles Kinesin motor domain profile. 1 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme53616g00001 97 Gene3D Kinesin motor domain 1 97 IPR036961 -
Trme53616g00001 97 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 97 IPR027640 GO:0003777|GO:0007018
Trme53616g00001 97 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 97 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme53616g00001 Trme-Chr53616 536 928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme53616g00001 1 97 Calmodulin-binding Proteins AT5G65930 38.144 3.04e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme53616g00001 K10406 - gmx:100795476 182.185