Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme536003g00001 ATGCACGTAGGGGCTGTACAACCTGGTGAAAGAGCCTTGGTCATAGATGATCTTATAGCCACTGGTGGAACCTTATGTGCTGCAATTAAACTTCTAG 97 0.4536 MHVGAVQPGERALVIDDLIATGGTLCAAIKLL 32
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme536003g00001 32 Gene3D - 1 32 IPR029057 -
Trme536003g00001 32 CDD PRTases_typeI 1 32 IPR000836 -
Trme536003g00001 32 SUPERFAMILY PRTase-like 1 32 IPR029057 -
Trme536003g00001 32 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme536003g00001 Trme-Chr536003 154 250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme536003g00001 1 32 PRT Gene Family AT1G27450 84.375 6.74e-14 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme536003g00001 K00759 - vvi:100245840 65.855