Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53553g00001 TATATTTTCGGGTTTGCTTTCGCTTTCGGCACACCTTCAAATGGTTTCATTGGACAACATTTTTTCGGTCTTAGCGAATTTCCTTCTCAGTCCTTTGATTACGGATATTTTCTGTATCAATGGGCATTCGCAATCGCTGCAGCAGGAATCACGAGCGGATCAATTGCGGAACGAACACAGTTCGTTTCGTATTTGATCTACTCGTCGTTTTTAACTGGTTTAGTTTATCCAATTGTTGCTCATTGGTTTTGGTCTGCTGATGGTTGGGGCAGTCCTGCTAGATCAGAGAATCTTTTGTTCGGTTCCGGCGTTATCGATTTTGCAGGTTGTGGTGTTGTTCATTTAGTTGGTGCTGTTGCTGGTTTTTGGGGTGCTTTTATTGAAGGACCAAGAATTGGTAGATTTGATCATGAAGGTAAACCAGTTTCTTTGAGAGGACATAGTGGTACCTTAGTTGTTATGGGAACATTTTTACTTTGGTTCGGTTGGTACGGTTTTAACCCCGGTTCTTTTCTCAACATTTTGAAAACTTATGGTGAAAGTGGTAATTACTACGGTCAATGGAGCGCGATAGGAAGGACGGCCGTGACAACTACATTAGCAGGTTGCACGGCCGCCCTCACAACATTGTTTGGCAAACGTATGCAAACCGGTCATTGGAATGTGACCGATGTTTGTAACGGTTTATTAGGCGGTTTTGCTGCTATAACCGCAGGGTGTTCTGTTGTGGATCCGTGGGCCGCAATCATTTGTGGATTTATTGCTGCTTGGGTTTTAATTGGATGTAATATGTTAGCTGAGAAATTTCACTATGATGATCCTCTTGAAGCTGCACAACTTCATGGTGGTTGTGGAACTTGGGGGATAATTTTCACTGCCTTGTTTGCTAAGAAACAATATGTGAATGAGGTTTATGGTGGTTCCCTTAA 929 0.4252 YIFGFAFAFGTPSNGFIGQHFFGLSEFPSQSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVAHWFWSADGWGSPARSENLLFGSGVIDFAGCGVVHLVGAVAGFWGAFIEGPRIGRFDHEGKPVSLRGHSGTLVVMGTFLLWFGWYGFNPGSFLNILKTYGESGNYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRMQTGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIICGFIAAWVLIGCNMLAEKFHYDDPLEAAQLHGGCGTWGIIFTALFAKKQYVNEVYGGSL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53553g00001 309 FunFam Ammonium transporter 1 309 - -
Trme53553g00001 309 PANTHER AMMONIUM TRANSPORTER 1 301 - -
Trme53553g00001 309 SUPERFAMILY Ammonium transporter 1 302 - -
Trme53553g00001 309 ProSitePatterns Ammonium transporters signature. 106 131 IPR018047 GO:0008519|GO:0016020|GO:0072488
Trme53553g00001 309 Gene3D Ammonium transporter AmtB like domains 1 309 IPR029020 -
Trme53553g00001 309 Pfam Ammonium Transporter Family 1 306 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme53553g00001 Trme-Chr53553 1 929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme53553g00001 1 308 Inorganic Solute Cotransporters AT4G28700 80.000 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme53553g00001 K03320 - qsa:O6P43_006828 570.852