Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53483g00001 GCCAGGCTTCTACCAGGAAGAACAGATAATGCCATTAAGAACCACTGGAACTCTACTTTGAGGCGTCGGGGAATTGACCAGATTAGGTTAGAATCTGGTATCATGGTAGAAGCGAAAGCATCATCAGAAGAAACTCTATCATGTGGAGATGTTAATTCTTTGAAATCCTCAGAAGGAAGAGATGTTAGCTCTATGGAGATTGTGGCCGATAAATATGAAGGCAATGCAAGGACTGATGCTCAACTATACCATGAAGTCAGGGATCCTCCGACCCTTTTTAAGCCTGTAGCACGTGTAAGTGCTTTTAACGTGTACAACACTTTCAATGGTTCACAGCCTTCAACATCAGTTCCAAGACCTGTTCCAATGCAAGGACCTATTTTACATCCGCCAAAATCAGATGCGGAAATTTGTAAAATGCTCAACANNNNNNNNNNANNNNNGTCGGTGCCTAACCAGTGTGGTCATGGATGCTGTTCTTCTCTAAATGGTAACAGCTCAAAAATCTCTCTGTTGGGACCAGAATTCATTGAGTATTCAGAACCTCAGTCTTTCCCAAGTTTTGAGCTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGGGTGATACTGCTGGCAGGGTTAATATGTAA 675 0.4133 ARLLPGRTDNAIKNHWNSTLRRRGIDQIRLESGIMVEAKASSEETLSCGDVNSLKSSEGRDVSSMEIVADKYEGNARTDAQLYHEVRDPPTLFKPVARVSAFNVYNTFNGSQPSTSVPRPVPMQGPILHPPKSDAEICKMLNXXXXXXSVPNQCGHGCCSSLNGNSSKISLLGPEFIEYSEPQSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDTAGRVNM 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53483g00001 224 Gene3D - 1 23 - -
Trme53483g00001 224 CDD SANT 1 20 IPR001005 -
Trme53483g00001 224 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 24 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme53483g00001 Trme-Chr53483 1 675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme53483g00001 1 222 MYB Transcription Factor Family AT3G09230 43.750 9.54e-52 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme53483g00001 K09422 - gmx:100813406 322.398