Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme534340g00001 GAGGGTGAGAGAGGCATGACCAAGGACAATAACTTGTTGGGTACATTCAAGCTTTCTGGCATTGCTGCTGCTCCAAGGGGTGTTCCTCAGATCAATGTTTGTTTTGATATTAATTCTAATGGTATCTTTGATGTCTCTGCTGAGGACATGTCTACTGGGAAAAAGAACAAGATCACTATCACCAATGACAAAGGTAGGCTTTCAAAGGAGGAGATTGAGAAGATGGTGCAGGAGGCAGAGAAGTACAAGGTTGAGGATGAGGAGCACAAGAAAAA 275 0.4327 EGERGMTKDNNLLGTFKLSGIAAAPRGVPQINVCFDINSNGIFDVSAEDMSTGKKNKITITNDKGRLSKEEIEKMVQEAEKYKVEDEEHKK 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme534340g00001 91 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 90 IPR029047 -
Trme534340g00001 91 PANTHER HEAT SHOCK PROTEIN 70KDA 1 88 IPR013126 GO:0005524|GO:0140662
Trme534340g00001 91 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 91 IPR029047 -
Trme534340g00001 91 Pfam Hsp70 protein 1 90 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme534340g00001 Trme-Chr534340 1 275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme534340g00001 1 91 Calmodulin-binding Proteins AT3G12580 83.516 2.38e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme534340g00001 K03283 - psom:113287014 157.918