Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme534039g00001 ATGGTGGAAGCCATGAAGAATGTAGCGAAGCTAAATGTTGAGTTGACTGTGGAAGAGAGAAACCTTCTATCAGTTGGGTACAAGAATGTAGTGGGTGCTCATAGGGCTTCATGGAGGATTCTATCCTCAATTGAGCATAAGGAAGAATCTAAA 153 0.4183 MVEAMKNVAKLNVELTVEERNLLSVGYKNVVGAHRASWRILSSIEHKEESK 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme534039g00001 51 PANTHER 14-3-3 PROTEIN 1 51 IPR000308 -
Trme534039g00001 51 ProSitePatterns 14-3-3 proteins signature 1. 20 30 IPR023409 -
Trme534039g00001 51 Gene3D - 1 51 IPR036815 -
Trme534039g00001 51 Coils Coil 1 21 - -
Trme534039g00001 51 Pfam 14-3-3 protein 1 51 IPR023410 -
Trme534039g00001 51 SUPERFAMILY 14-3-3 protein 1 50 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme534039g00001 Trme-Chr534039 1 153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme534039g00001 1 51 14-3-3 family AT1G34760 86.275 2.66e-25 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme534039g00001 K06630 - gmx:100807980 94.3597