Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53368g00001 ATGGATTGTTGTGGAAGAAACCTTGAATGCCCTAAGGCTAGCTTGGTCACAGGGTATGATCCTGAATCTGGTTTTGATCATTGTTCGTGTTTTCCAAAAGATAATATTATTGTTGACAATGATGATGGGGAATTTGAATGTTCAACATCTTATGGAGATGAGGATGATGGTAGTGGTAGTGGTGGTGGTGGTTACCATGATATATCTTTTTGTATAGGTGATAGTGATATTAGGTGTAATAGATACTCTATGGCCTCGCTTTCGAGGCCTTTTATGGCAATGTTATATGGTGGATTTGTTGAGTCTAGGAGGGAGAAGATTAATTTCTCCCTGAATGGTGTATCTATTGATGTGATGATGGCTGTTGAGGTTTTTAGTAGAACCAAGAGGTTGAGTCTATTTGCAAATAATGTTGTCGTAGAGATGCTTTCTTTTGCGAATAGGTTTTGTTGTGAGGAGATGAAATCTGCTTGTGATGCTCATTTGGCTTCTTTGGTATTCGACATGGATGATGCATTGTTGTTGATTGAGTATGGACTTGAGGAGAACGCGTATCTGCTCGTGGCAGCTTGCTTGCAGGTGTTTCTGAGAGAGCTTCCTAGTTCGATGCACAGTTTGAGTGTTTTGAAATTGTTTTGTAGTGTAGAGGGTAGAGATAGATTGGCCTTTGTAGGGCATGTTTCGTTTTCGTTGTATTGTTTTTTGAGTCAGGTTGCAATGGAGGAAGATATGAAATCCAACACGACTGTGATGCTCTTAGAGAGGTTAGGAGAGTGTGCGGCGAGTGGTTGGCAGAAGCAACTTGCTTATCACCAATTAGGTGTTGTGATGCTTGAGAGAAAAGAATACAAAGATGCACAACAGTGGTTTGAGGCTGCTGTTAAGGAAGGACATATTTATTCTTCAGT 908 0.4053 MDCCGRNLECPKASLVTGYDPESGFDHCSCFPKDNIIVDNDDGEFECSTSYGDEDDGSGSGGGGYHDISFCIGDSDIRCNRYSMASLSRPFMAMLYGGFVESRREKINFSLNGVSIDVMMAVEVFSRTKRLSLFANNVVVEMLSFANRFCCEEMKSACDAHLASLVFDMDDALLLIEYGLEENAYLLVAACLQVFLRELPSSMHSLSVLKLFCSVEGRDRLAFVGHVSFSLYCFLSQVAMEEDMKSNTTVMLLERLGECAASGWQKQLAYHQLGVVMLERKEYKDAQQWFEAAVKEGHIYSSV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53368g00001 303 SUPERFAMILY POZ domain 64 163 IPR011333 -
Trme53368g00001 303 SMART BTB_4 66 166 IPR000210 GO:0005515
Trme53368g00001 303 PANTHER ETO1-RELATED 1 303 IPR044631 GO:0010105
Trme53368g00001 303 Pfam BTB/POZ domain 65 162 IPR000210 GO:0005515
Trme53368g00001 303 Gene3D Potassium Channel Kv1.1; Chain A 61 205 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme53368g00001 Trme-Chr53368 1 908 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme53368g00001 BTB 0.00018 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme53368g00001 - - pvu:PHAVU_008G094700g 429.483