Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5324g00001 GCAGTTCTCACTAAACAACAAGCTGCTTCCATAAGTAACCACCCTTCGATCCTCGCTGTTTTCGAGGATCGTCGCCGACAACTTCACACCACTCGTTCACCTCAGTTCCTTGGACTTCGTAACCAACGAGGTCTATGGTCTGAGTCTGATTACGGCTCCGATGTAATTGTCGGAGTTTTTGATACTGGCATTTGGCCTGAACGACGAAGCTTCTCCGATTTGAATTTGGGTCCTATTCCNCGTCGTTGGAAAGGGGTTTGTGAATCTGGTGAAAAATTTTCACCCAGAAACTGTAACAGAAAACTCATCGGTGCTAGATTCTTCTCCAAGGGTCATGAAGTTGGTGCTGGTTCTGCTGGTCCTTTGAATCCAATCAACGAAACAGTTGAATTCCGATCCCCTCGTGACGCCGACGGTCATGGGACCCACACAGCTTCCACTGCCGCTGGCCGTTACGCTTTCCAAGCAAACATGTCAGGTTACGCTTCCGGTATCGCGAAAGGTGTTGCTCCGAAAGCACGGTTAGCGGTTTACAAAGTTTGCTGGAAGAATTCCGGTTGCTTCGACTCCGATATCCTCGCCGCTTTCGACACAGCCGTCACCGATGGTGTTGATGTCATTTCCATTTCAATCGGTGGCGGAGATGGTATAGCTTCACCTTACTATCTCGACCCAATTGCAATCGGATCTTATGGCGCTGTTTCAAGAGGCGTGTTCGTTTCTTCCTCCGCCGGAAACGACGGACCAAGTGGAATGTCAGTAACAAATCTTGCTCCATGGTTAACAACAGTCGGAGCAGGCACAATCGATCGAGATTTCCCAGCTAAAGTCATTATCGGCGACGGAAGAAAATTCTCCGGCGTGTCACTCTACTCCGGTGAAGCATTAAAAGGTAAAATGTATCAATTAGTTTACCCTGGAAAATCTGGTGTTCTTGGTGATTCACTTTGCATGGAAAATTCACTGGATCCAAAACAAATAAGAGGAAAAATCGTGGTGTGTGATAGAGGAAGTAGTCCAAGAGTAGCAAAAGGTCTTGTTGTGAAGAAAGCTGGTGGCGTTGGAATGATTCTCGCAAACGGAATCTCAAACGGTGAAGGACTTGTCGGTGATGCTCATCTTCTTCCTGCATGTGCCGTTGGTTCCAACGAAGGAGATATAATCAAAGCTTATATCTCTTCAACNNNNNTNNNNNNNNNNACAATTGATTTCAAAGGAACTATCCTCGGAATTAAACCGGCACCGGTTCTTGCTTCGTTTTCAGCCAGAGGACCGAACGGTTTAAACCCACAGTTACTTAAACCGGATTTAATTGCTCCGGGTGTTAACATTCTCGCGGCTTGGTCTGATGCAGTGGGTCCCACTGGTCTTGATTCCGATACACGTAGAACTGAGTTCAATATCTTGTCTGGTACTTCAATGGCTGCACCTCATGTTAGTGGTGCGGCGGCGTTGTTGAAATCTGCTCATCCAGATTGGAGTCCGGCAGCCGTGAGATCCGCTATGATGACCACCGCTACTGTTCTTGATAACAGAAATCTNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNAATTTGGGTAATGCAATGGATCCTGGGTTGATTTATGATATTACTAACAGTGATTACGTTAATTTTCTTTGTTCTATTGGTTATGAACCAAAGGTTATTCAGGTAATTACTCGTACACCTGAGAATTGTCCGGCGAGAAAAGCTTCGCCGGAGAATTTAAATTATCCGTCATTTGTGGCTATGTTTCCGGTGGCTTCTAGAAAGTTGGCTTCAAAGACGTTTATAAGAACNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGAGGCTGTGAAGAAGAGGAGTTATGTGGTGACGGTAACGGCGGATACCCGAAATATGAAAATGGATCCATCTGGTGCAGTATTCGGGTCGCTTTCGTGGACGGATGGTAAACATGTGGTTCGGAGCCCCATTGTGGTTACTCAAATAGAACCGTTGTAG 2097 0.422 AVLTKQQAASISNHPSILAVFEDRRRQLHTTRSPQFLGLRNQRGLWSESDYGSDVIVGVFDTGIWPERRSFSDLNLGPIPRRWKGVCESGEKFSPRNCNRKLIGARFFSKGHEVGAGSAGPLNPINETVEFRSPRDADGHGTHTASTAAGRYAFQANMSGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDTAVTDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPAKVIIGDGRKFSGVSLYSGEALKGKMYQLVYPGKSGVLGDSLCMENSLDPKQIRGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSNEGDIIKAYISSTXXXXXTIDFKGTILGIKPAPVLASFSARGPNGLNPQLLKPDLIAPGVNILAAWSDAVGPTGLDSDTRRTEFNILSGTSMAAPHVSGAAALLKSAHPDWSPAAVRSAMMTTATVLDNRNLXXXXXXXXXXXXXXXXXXXXXNLGNAMDPGLIYDITNSDYVNFLCSIGYEPKVIQVITRTPENCPARKASPENLNYPSFVAMFPVASRKLASKTFIRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVKKRSYVVTVTADTRNMKMDPSGAVFGSLSWTDGKHVVRSPIVVTQIEPL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5324g00001 698 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 692 IPR045051 -
Trme5324g00001 698 ProSiteProfiles Serine proteases, subtilase domain profile. 27 541 - -
Trme5324g00001 698 CDD Peptidases_S8_3 27 507 IPR034197 -
Trme5324g00001 698 SUPERFAMILY Subtilisin-like 28 513 IPR036852 GO:0004252|GO:0006508
Trme5324g00001 698 MobiDBLite consensus disorder prediction 118 144 - -
Trme5324g00001 698 Pfam Subtilase family 52 509 IPR000209 GO:0006508|GO:0008236
Trme5324g00001 698 Coils Coil 511 514 - -
Trme5324g00001 698 Gene3D Peptidase S8/S53 domain 54 554 IPR036852 GO:0004252|GO:0006508
Trme5324g00001 698 Pfam Fibronectin type-III domain 649 692 IPR041469 -
Trme5324g00001 698 Coils Coil 536 536 - -
Trme5324g00001 698 ProSitePatterns Serine proteases, subtilase family, serine active site. 471 481 IPR023828 -
Trme5324g00001 698 FunFam Subtilisin-like protease SBT1.5 54 289 - -
Trme5324g00001 698 Gene3D - 270 409 - -
Trme5324g00001 698 Gene3D - 558 618 - -
Trme5324g00001 698 FunFam subtilisin-like protease SBT1.5 270 409 - -
Trme5324g00001 698 PRINTS Subtilisin serine protease family (S8) signature 470 486 IPR015500 -
Trme5324g00001 698 PRINTS Subtilisin serine protease family (S8) signature 136 149 IPR015500 -
Trme5324g00001 698 PRINTS Subtilisin serine protease family (S8) signature 52 71 IPR015500 -
Trme5324g00001 698 CDD PA_subtilisin_like 277 402 - -
Trme5324g00001 698 Gene3D - 645 695 - -
Trme5324g00001 698 Coils Coil 647 652 - -
Trme5324g00001 698 SUPERFAMILY PA domain 318 397 IPR046450 -
Trme5324g00001 698 Pfam PA domain 302 387 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5324g00001 Trme-Chr5324 1 2097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5324g00001 1 698 Subtilisin-like Serine Gene Family AT4G34980 71.000 0.0 1006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5324g00001 - - gmx:100817537 1120.15