Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53165g00001 GCGCCTCCTTTCTTGGTTCGTAAAGTGTTCACTCAAATATTCTCATTCATCGATGTTCAATTATTCAACAGTCTTCTGCTGCGCCGTGAGTGTTGTTCATTCAGCAACGGGGAGTATGTGAAGACAGGTTTGGCTGAATTAGAACAGTGGTGCATCGAGGCGACAGAGGAGTACACCGGCTCAGCTTGGGAGGAACTGAAACATATCAGGCAGGCAGTTGGATTCCTGGTGATACATCAAAAACCCAAGAAGTCCCTGAATGAAATAACTAAGGAGCTTTGTCCTGGTCTCAGTATACAACAGTTATACAGGATTAGTACAATGTACTGGGATGACAAATACGGCACTCACAGCGTGTCTACAGACGTAAGTTAG 375 0.4507 APPFLVRKVFTQIFSFIDVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCIEATEEYTGSAWEELKHIRQAVGFLVIHQKPKKSLNEITKELCPGLSIQQLYRISTMYWDDKYGTHSVSTDVS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53165g00001 124 ProSiteProfiles Dilute domain profile. 1 124 IPR002710 -
Trme53165g00001 124 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 3 122 - -
Trme53165g00001 124 Pfam DIL domain 9 112 IPR002710 -
Trme53165g00001 124 SMART DIL_2 8 115 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme53165g00001 Trme-Chr53165 104 810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme53165g00001 1 123 Myosins gene family AT5G20490 91.057 4.04e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme53165g00001 K10357 - gmx:100804820 250.366