Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme531616g00001 ATGGAGCTTTTGAATTTCATGTATAGCAATTCTCTGAGTGTGTCCTCACCACCTGCATTGTTGGACGTGCTGATGGCGGCTGACAAATTTGAAGTCGCATCCTGCATGAGGTACTGCAGCCGAGTCTTGCGGAACATACCTATGACACCGGAGTCTGCATTGCTCTACCTCGATCTTCCTTCCAGTGTCTTGATGGCTGATGCTGTTCAGCCATTGACTGATGCAGCCAAGCAATAT 237 0.4852 MELLNFMYSNSLSVSSPPALLDVLMAADKFEVASCMRYCSRVLRNIPMTPESALLYLDLPSSVLMADAVQPLTDAAKQY 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme531616g00001 79 PANTHER OS02G0260700 PROTEIN 1 79 IPR045890 -
Trme531616g00001 79 Gene3D Potassium Channel Kv1.1; Chain A 1 78 IPR011333 -
Trme531616g00001 79 Coils Coil 76 79 - -
Trme531616g00001 79 Pfam BTB/POZ domain 2 44 IPR000210 GO:0005515
Trme531616g00001 79 SUPERFAMILY POZ domain 2 45 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme531616g00001 BTB 6.7e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme531616g00001 - - gmx:100781329 150.984