Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5303g00001 CCGGCATATTTGGATCCAAATCTCCAGCCTAGTGAATTGGCCACAGGCGTTAACTTTGCATCCGGTGGTGCAGGATATGATCCTTTGACATCAAAATTAGGGGTAGCTATATCTATGTCTGGGCAGTTAGACTTATTCAAAGATTACATTGTGAAGCTTAAAGGAGTTGTTGGTGAAGATAGAGCAAAGTTCATCATAGGCAATAGTCTTTTTCTTGTGGTATTAGGAAGCAATGATATTTCCAACACATACTACTTGTCCCGTTTGAGACAAGTGCAATATGATTTTCCTACATACTCTGACCTTTTAGTCAACTCAGCTTATAATTTCTACCAGAGAACAATGGCAGGGGGGATAGAAAGAAAATGTGTACAAGAGTACAATGATGCAGCTGTGTTCTTTAACAACAAGTTGTCAATAGGGATTGATTCTTTTAAGCAGAATTTTCCAAGTTGCAGGATTGCTTACATGGATGTTTACAACCCTCTACTGGATATCATTGCTATAAAGTGGGAGACAGAGGGTGTTGTGGCACAGGCAAAATAG 546 0.3956 PAYLDPNLQPSELATGVNFASGGAGYDPLTSKLGVAISMSGQLDLFKDYIVKLKGVVGEDRAKFIIGNSLFLVVLGSNDISNTYYLSRLRQVQYDFPTYSDLLVNSAYNFYQRTMAGGIERKCVQEYNDAAVFFNNKLSIGIDSFKQNFPSCRIAYMDVYNPLLDIIAIKWETEGVVAQAK 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5303g00001 181 PANTHER GDSL ESTERASE/LIPASE EXL3 112 168 - -
Trme5303g00001 181 Pfam GDSL-like Lipase/Acylhydrolase 8 166 IPR001087 GO:0016788
Trme5303g00001 181 Gene3D SGNH hydrolase 1 172 IPR036514 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5303g00001 1 167 Pollen Coat Proteome AT1G75910 34.184 8.69e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5303g00001 - - gmx:100776769 231.491