Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme53006g00001 ATGAAATTGGATGGGGTAAGTGAAGGACAGTTTTACCAGGTTTTGCTATTTGAGCTTGATGCGATCCGCAAGGCTTGTGCATCTTTGGAACCTGGTTACCAACCTCCGGTTACATTTGTCGTTGTTCAAAAAGGGCATCACACTAGACTCTTCGCAAACAATCACAACGACAGAAACAGCACCGATAGGAGTGGGAATATCTTGCCAGGTACCGTGGTGGATTCGAAGATATGTCATCCTACCGAGTTCGACTTCTACTTGTGCAGTCACGCAGGAATTCAGGGTACAAGTAGACCGGCTCACTATCGTGTTATATGGGACGATAATAACTTCAGTGCCGATGAGATTCAGTCCTTAACTAACAACTTGTGCTACAC 377 0.4536 MKLDGVSEGQFYQVLLFELDAIRKACASLEPGYQPPVTFVVVQKGHHTRLFANNHNDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYRVIWDDNNFSADEIQSLTNNLCYT 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme53006g00001 126 SMART Piwi_a_2 1 126 IPR003165 GO:0003676
Trme53006g00001 126 Pfam Piwi domain 4 126 IPR003165 GO:0003676
Trme53006g00001 126 Gene3D - 2 126 IPR036397 GO:0003676
Trme53006g00001 126 ProSiteProfiles Piwi domain profile. 1 126 IPR003165 GO:0003676
Trme53006g00001 126 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 4 126 - -
Trme53006g00001 126 SUPERFAMILY Ribonuclease H-like 3 125 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme53006g00001 Trme-Chr53006 82 814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme53006g00001 4 126 Eukaryotic Initiation Factors Gene Family AT5G43810 90.244 6.91e-78 246