Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5296g00001 GTTTATCTAGAAATCCCAAATGGAGAAAGTTTTGCAGAAGCCCTTCATATTAAGGGAATCCCGTATGTTGTATTTTGGAAGAATGCCTTTTCTCAATATGCTGCCTGCCATTTTCGTCAAGCATTTTTTTCAGTGGTGCAGAGTTCATGTACACATACATGGGATGCTTTCCACCTTGCACATGCCTCTTTTGAACTTTACTGTGTTCAAAACAGTCAAGTACTTCCTAATGATAGCAATGATGCTGATAGCGATATGGGGCCACACCTTCTTGGCGACTGCCTCAAAATTAATGTTGACCCTCCAGAGATGGGTGAAGAAGAAGATGAAGATGATGAAGAAAGTTCAGGCAATCTTCCTTCCATACAGATTCATGATGATGAAGTGAATTTGAGATTTCTCATCTGTGGTGCACCTTCCACTGTTGATGAGTCATTACTGAGATCTTTGGAGGATGGACTCAGAGCTCTCTTAACTATTGAAGTATGTTGA 492 0.4065 VYLEIPNGESFAEALHIKGIPYVVFWKNAFSQYAACHFRQAFFSVVQSSCTHTWDAFHLAHASFELYCVQNSQVLPNDSNDADSDMGPHLLGDCLKINVDPPEMGEEEDEDDEESSGNLPSIQIHDDEVNLRFLICGAPSTVDESLLRSLEDGLRALLTIEVC 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5296g00001 163 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 1 162 IPR042293 -
Trme5296g00001 163 MobiDBLite consensus disorder prediction 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5296g00001 Trme-Chr5296 501 1901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5296g00001 1 162 ARID Transcription Factor Family AT3G43240 56.442 2.01e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5296g00001 - - vvo:131616466 297.36