Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52963g00001 GTTGACTTGATTGATATGGCTGCAAAGCTTCTGCATTCTTTAGCAGATGATAATCAAGATCTGCAGAAGCAGATTGGATGTATGACAGGAATATTTCAACTGTTTGATCGTCATCAGATGCTCACGGCTCGCCGGATTAGTCAGAAGAGGCTTCCTTCTGATACGTAA 168 0.4226 VDLIDMAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRHQMLTARRISQKRLPSDT 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52963g00001 55 PANTHER LONGIFOLIA PROTEIN 6 51 IPR033334 GO:0051513
Trme52963g00001 55 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52963g00001 Trme-Chr52963 296 646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52963g00001 6 53 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 54.167 5.06e-10 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52963g00001 - - gmx:100805643 94.7449