Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52821g00001 ATGACCCCAAGGGAAGTATTAGCTGAGATGAAGTTGGGAGAATTTGTTCTCCCTAAAGGCATCTACATGTGGTTGTTCGTGACATTGTTGCATCGCGACACCGATAATTGGGGACCAGATGCTACAGAATTCAAGCCAGAAAGATTTGCAAATGGTGTTTCTGCAGCTTGTAAGTATCCTCAAGCCTATATACCATTTGGACTTGGGAGTCGAATTTGCCCCGGCCAAAACTTCGCCATTACAGAAATGAAGGTAGTACTCACTCTTCTTCTGTTTAATTTCTCCTTTGATGTTTCACCAAATTATCGCCATTGTCCTGTGTATAATATGTTGTTAATGCCAAAATATGGTGTAAGGCTTCTTGTTAGCAAGGTTCTAAACACACCTAAATGA 393 0.4097 MTPREVLAEMKLGEFVLPKGIYMWLFVTLLHRDTDNWGPDATEFKPERFANGVSAACKYPQAYIPFGLGSRICPGQNFAITEMKVVLTLLLFNFSFDVSPNYRHCPVYNMLLMPKYGVRLLVSKVLNTPK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52821g00001 130 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 117 - -
Trme52821g00001 130 SUPERFAMILY Cytochrome P450 2 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme52821g00001 130 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 66 75 IPR017972 GO:0005506|GO:0016705
Trme52821g00001 130 Pfam Cytochrome P450 2 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme52821g00001 130 PRINTS E-class P450 group IV signature 32 50 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme52821g00001 130 PRINTS E-class P450 group IV signature 73 91 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme52821g00001 130 PRINTS E-class P450 group IV signature 15 29 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme52821g00001 130 PRINTS E-class P450 group IV signature 57 73 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme52821g00001 130 Gene3D Cytochrome P450 1 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52821g00001 4 122 Cytochrome P450 AT5G24900 51.261 3.50e-45 149