Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme527934g00001 ATGTTTGGATACAATAAACTTGAAGAAAAGAAGGAAAGTAAAATACTGAAGTTTTTAGGGTTTATGTGGAATCCTTTGTCATGGGTTATGGAAGCAGCTGCTATTATGGCCATTGCTATGGCACATGGAGGG 132 0.3788 MFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGG 44
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme527934g00001 44 PANTHER CALCIUM-TRANSPORTING ATPASE 2 44 - -
Trme527934g00001 44 Gene3D - 21 44 - -
Trme527934g00001 44 Pfam Cation transporter/ATPase, N-terminus 2 36 IPR004014 -
Trme527934g00001 44 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 41 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme527934g00001 Trme-Chr527934 34 255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme527934g00001 1 44 Primary Pumps ATPases AT3G60330 90.909 1.20e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme527934g00001 K01535 - psat:127081532 62.3882