Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52745g00001 ATGAAAGCAGGGAAATTGAACCATGATGAAGATGAGTATGATGATGACGATTTCAATTCTTCCAAAAAACAAGGCACTTCTTCTGCCCCTAACACCAATAAAGATGGAAAAGCTACTGATAAGGCTAGTGTAATAAGATCGAAACATTCTGTAACCGAGCAGCGAAGAAGAAGCAAGATAAATGAGAG 188 0.383 MKAGKLNHDEDEYDDDDFNSSKKQGTSSAPNTNKDGKATDKASVIRSKHSVTEQRRRSKINE 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52745g00001 62 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 7 62 IPR044295 GO:0003700|GO:0006351|GO:0046983
Trme52745g00001 62 MobiDBLite consensus disorder prediction 39 62 - -
Trme52745g00001 62 MobiDBLite consensus disorder prediction 22 38 - -
Trme52745g00001 62 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52745g00001 Trme-Chr52745 16 384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52745g00001 1 62 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 60.938 1.70e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52745g00001 - - gmx:100795416 96.6709