Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52716g00001 GAAGATTTGAAGGATCTTGCTGTGGACCATTCAATTTGTCCATCTAAAGATGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGACAAATGGTATGCTGTTCAGGTTTAATCAAATCTTGTTCTTAA 126 0.3968 EDLKDLAVDHSICPSKDEGGMLGWVRKGQMVCCSGLIKSCS 41
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52716g00001 41 Gene3D - 1 33 IPR046357 GO:0003755
Trme52716g00001 41 SUPERFAMILY FKBP-like 2 31 - -
Trme52716g00001 41 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 1 30 IPR000297 GO:0003755
Trme52716g00001 41 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52716g00001 Trme-Chr52716 341 466 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52716g00001 1 31 Sulfurtransferasese or Rhodanese AT5G19370 64.516 7.58e-11 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52716g00001 - - zju:107410702 62.003