Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme526174g00001 GTTTTTGGATCCGTTTTTCAGCCGGATCGACCCGATGAGTTGCTCCGTGTTCAAGCGGCAGGTGGGCGCGTGATCTACTGGGATGGTCCAAGAGTGCTTGGTGTACTCGCAATGTCTAGAGCCATTGGTGCGTACGATAACATAACAAGCGCATTTTAG 159 0.5157 VFGSVFQPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGAYDNITSAF 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme526174g00001 52 Pfam Protein phosphatase 2C 7 46 IPR001932 -
Trme526174g00001 52 SUPERFAMILY PP2C-like 7 48 IPR036457 -
Trme526174g00001 52 Gene3D - 5 50 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme526174g00001 Trme-Chr526174 2 160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme526174g00001 7 43 PP2C-type Phosphatase Gene Family AT5G59220 91.892 4.06e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme526174g00001 K14497 - aew:130790503 77.0257