Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52583g00001 ATGGATGATGACGGTGATATGGCTGAAATGTACCTTACGGAGAAGAAAAGACGGATGGAATTATCATTTTATGGAGATCAGTCTATGCTTGGATATAGATCAGTTGACGGCGCGTCTATCTCTGCTCCAGTCACTCCTGTTTCATCACCACCTGATTCTAGAAGGCTTGAGAAGAGCTTGAGCATGGCTAGGAGTCGACATGAGAGCATGAGGAGTAGCGAAAGTAATACAGAAAATATAGAAGAGCTTGAGATGTTGTTAGAAGCATACTTTGTTGTCATTGACAGCACTCTAAACAAGTTGACATCTTTAAAAGAATACATCGATGACACGGAAGATTTCATCAACATTCAACTGGATAATGTGCGGAATCAGCTTATCCAGTTTGAGCTTTTGCTCACAACTGCAACATTTGTGGTTGCAATATTTGGAGTGGTGGCAGGAGTATTTGGGATGAACTTTGAAATTCCATTCTTTGATGTCCCATCTGCATTCCAGTGGGTCCTTATAATAACAGGAATTTGTGGAGTGTGTATATTTTCTGCATTTGTATGGTTCTTCAAGTACAGAAGACTCATGCCCCTATAA 588 0.4048 MDDDGDMAEMYLTEKKRRMELSFYGDQSMLGYRSVDGASISAPVTPVSSPPDSRRLEKSLSMARSRHESMRSSESNTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPFFDVPSAFQWVLIITGICGVCIFSAFVWFFKYRRLMPL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52583g00001 195 Gene3D Magnesium transport protein CorA, transmembrane region 1 126 - -
Trme52583g00001 195 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 132 185 IPR045863 -
Trme52583g00001 195 MobiDBLite consensus disorder prediction 41 76 - -
Trme52583g00001 195 MobiDBLite consensus disorder prediction 41 55 - -
Trme52583g00001 195 MobiDBLite consensus disorder prediction 57 76 - -
Trme52583g00001 195 FunFam Magnesium transporter MRS2-1 133 193 - -
Trme52583g00001 195 Pfam CorA-like Mg2+ transporter protein 70 187 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trme52583g00001 195 Gene3D Magnesium transport protein CorA, transmembrane region 133 193 - -
Trme52583g00001 195 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 193 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52583g00001 Trme-Chr52583 46 925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52583g00001 1 195 MRS2 Gene Family AT1G16010 88.205 3.05e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52583g00001 K16075 - gmx:100779803 341.273