Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52549g00001 AAGGACAGCTTCATAACCCACAGAGCATTTTGTGATGCATTAGCTGAAGAAAGTGCAAGAATGTCAGCAAATATCCAATTATCCACCACAAACCCACTATCCCAATCTCTCTTCCTCTTCCCAAATCAACAAAGCCAAATCACATGGGACCCTCCTCAACAAAACCCTAACCCTAATACTCTCACATCATCCCTACCACACCATAACATGATCAAGCATGAATCACATCAAAATTTTCACAACAACAACATCTCTTCTTCTCCTCTTCCCTCATTTCTTCATGATCACCCCAACAACCCTAATTATAAGACCAATATCATGATGACATCATCACCCTTCCACGTCAGCACACAACAGCCTTCCTCCACTTCTGCCACGTCACCACACCTCTCAGCAACTGCACTTCTCCAGAAAGCGGCCACTGTCGGAGCCACCGCCATCACAGGCGGCCAACCTGTTCATCTGCCACGTCAGCTCAGCATGAGCGAGTTTGGATCGGTGACTCAGCTCGACTCGGTTGATCACTACATTAACAACATGAGAGGCCGGAATCTTAAGAACAACGATCTTACGAGGGACTTTCTTGGCCTTACTAACGGCGGAGGAAATGGCGGTTCCGTTGACGTTAGCATCGACGTGAAGGATATGCTAACATTCACAGGAGGTTTAGAGTATCACGGCCACCAACATCATGAAAACATGCCGATG 708 0.4689 KDSFITHRAFCDALAEESARMSANIQLSTTNPLSQSLFLFPNQQSQITWDPPQQNPNPNTLTSSLPHHNMIKHESHQNFHNNNISSSPLPSFLHDHPNNPNYKTNIMMTSSPFHVSTQQPSSTSATSPHLSATALLQKAATVGATAITGGQPVHLPRQLSMSEFGSVTQLDSVDHYINNMRGRNLKNNDLTRDFLGLTNGGGNGGSVDVSIDVKDMLTFTGGLEYHGHQHHENMPM 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52549g00001 236 MobiDBLite consensus disorder prediction 46 66 - -
Trme52549g00001 236 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 205 IPR031140 -
Trme52549g00001 236 MobiDBLite consensus disorder prediction 78 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52549g00001 Trme-Chr52549 230 937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52549g00001 1 225 IDZ Gene Family AT4G02670 30.962 8.12e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52549g00001 K25870 - gmx:100780056 206.068