Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5248g00001 ATGTCTTCTGTAACAAACCCAGTTCTCATATCAGTTCAAAGACCTCAAATTTCTTCACTTTTTTTGTTACCTAAAAGAGTTTCAACTTCAACTAGTTATGGATTGTTGAAGTCTCGAACAGTACTTCGACATGAGGCTAAAGATTCAAGCTTAGCTTTCTCTCCATTGGTGAAAGGGTTGAGATTAAGAGAAAGAAGGTTTCCAGTTGTTGCAGCCTTAGCAGCAGATGCTGATGATAGTGAAATTGGAATCACAAAAGGGTCTGTCCAATCCTCAAAGAGTTTTGGAGAGAAATTTCCTGCATTGGTTACTGGTTTCTTTTTCTTTATGTGGTACTTCTTAAATGTGATTTTCAACATACTCAACAAGAAAGTCTACAATTATTTTCCATATCCATATTTTGTTTCTGTTGTACATCTCCTTGTAGGGGTGGTATATTGCCTTATTAGCTGGGGTGTAGGTCTACCAAAACGTGCGCGTCTAGCAAGCAGACCGGCCAGTTCTTGGTTCAACCAGCAGACTGGTCAGTTATTGGTCCGGTTTTGTTCTGAAAACTCTGATTTTAGTTCTCAACTATGA 579 0.3869 MSSVTNPVLISVQRPQISSLFLLPKRVSTSTSYGLLKSRTVLRHEAKDSSLAFSPLVKGLRLRERRFPVVAALAADADDSEIGITKGSVQSSKSFGEKFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVVYCLISWGVGLPKRARLASRPASSWFNQQTGQLLVRFCSENSDFSSQL 192
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme5248g00001 192 Pfam Triose-phosphate Transporter family 103 170 IPR004853 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5248g00001 54 164 Antiporters AT5G46110 61.404 9.81e-39 135
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5248g00001 K15283 - qsa:O6P43_032918 191.43