Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme524874g00001 ATGATGCCGTTTGGAGCTGGGAGGAGAATGTGTCCTGGCTATGGTTTAGCATTGTTGCACTTGGAATATTTTGTAGCCAATTTTGTTTGGAATTTTGAATGGAAAGCTGTAGACGAAAATGAGGTTGATTTGTCAGAGAAGCTGCAATTTACAATAGTCATGAAGAACCCTTTGAAGGTTAATCTAATACCTAG 194 0.3866 MMPFGAGRRMCPGYGLALLHLEYFVANFVWNFEWKAVDENEVDLSEKLQFTIVMKNPLKVNLIP 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme524874g00001 64 Gene3D Cytochrome P450 1 64 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme524874g00001 64 Pfam Cytochrome P450 1 57 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme524874g00001 64 SUPERFAMILY Cytochrome P450 1 64 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme524874g00001 64 PRINTS E-class P450 group I signature 11 34 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme524874g00001 64 PRINTS E-class P450 group I signature 1 11 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme524874g00001 64 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 4 13 IPR017972 GO:0005506|GO:0016705
Trme524874g00001 64 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme524874g00001 Trme-Chr524874 41 234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme524874g00001 1 64 Cytochrome P450 AT3G03470 75.385 5.47e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme524874g00001 K24184 - gmx:100816275 122.094