Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52456g00001 ATGAGTAGAACTGCATGCTGGGCCTTAACATGCTTTGATACGCAGAATACCAGAGGTGTCTTTCTTCATGGTCCACCTGGTACGGGAAAGACTTCGCTGGTTCAATTATGTGCTCATGATGCTGAGGTCAATTTGTTCTCAATAAATGGACCTGAAATTGTTACCCAGTACTATGGGGAAAGTGAGAAAGCATTGAAGGATGTTTTNGATTCAGCCACTCAAGCTTCACCTGCCGTG 237 0.443 MSRTACWALTCFDTQNTRGVFLHGPPGTGKTSLVQLCAHDAEVNLFSINGPEIVTQYYGESEKALKDVXDSATQASPAV 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52456g00001 79 Pfam ATPase family associated with various cellular activities (AAA) 20 77 IPR003959 GO:0005524|GO:0016887
Trme52456g00001 79 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 72 IPR027417 -
Trme52456g00001 79 Gene3D - 8 79 IPR027417 -
Trme52456g00001 79 PANTHER AAA-FAMILY ATPASE 14 79 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52456g00001 17 79 Calmodulin-binding Proteins AT3G56690 63.492 1.48e-22 87.8