Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52417g00001 GTAACTATTACTCCTGAAGTGTCGTCGAAAGYAGTTAACAGATCCATTATAGCAGAACTTGTGAGGCTGTATAAAGAATCTGACCTTGGCATGAGGCTTCCAGCATATGATGGAAGAAAAAGTTTGTACACAGCGGGGGTTCTTCCCTTTTCCTGGAGAGAGTTTAAGATTAAGCTTATAGAGGAAGAGGATGGAATTAATGGCCCCAAGTATGGTTTTGTCCCATTGGGAGGTCCTTTTATTCACCTGATATTCGAACGCCACAACGGCTCGGAGAAGGATTGGAGTCATGGTGTGGATTTTACCAAAGCATAA 315 0.4286 VTITPEVSSKXVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGVLPFSWREFKIKLIEEEDGINGPKYGFVPLGGPFIHLIFERHNGSEKDWSHGVDFTKA 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52417g00001 104 Pfam N-terminal domain of argonaute 3 63 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52417g00001 Trme-Chr52417 244 930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52417g00001 1 70 Eukaryotic Initiation Factors Gene Family AT5G43810 81.690 8.03e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52417g00001 K11593 - gmx:100807513 133.265