Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52384g00001 GCTTTTGACGAAGCAATTGCTGAATTGGATACCCTTGGAGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTCACCCTATGGACCTCTGACATGCAGGATGATGGTGCCGATGAAATTAAAGAAGCAGCCCCAAAACCAGATGAACAGCAGTAA 174 0.4425 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKPDEQQ 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52384g00001 57 PANTHER 14-3-3 PROTEIN 1 39 IPR000308 -
Trme52384g00001 57 Gene3D - 1 51 IPR036815 -
Trme52384g00001 57 ProSitePatterns 14-3-3 proteins signature 2. 17 36 IPR023409 -
Trme52384g00001 57 SUPERFAMILY 14-3-3 protein 1 44 IPR036815 -
Trme52384g00001 57 Pfam 14-3-3 protein 1 35 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52384g00001 Trme-Chr52384 19 285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52384g00001 1 57 14-3-3 family AT1G78300 93.103 4.43e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52384g00001 K06630 - jre:108981796 114.005