Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52317g00001 GAGGATATTTTTCAGTCAGTGGGTGTTCCTTTGGTTAGAAATGCTTTAGCTGGTTACAACACTTCAATTCTGTCATATGGCCAGTCTGGAAGTGGAAAGACTTATACAATGTGGGGTCCTCCAAGTGCCATGTTTGAGGAGCACTCGCCGCAAAGTCACAAAGGAATTGTACCTCGGATCTTCCAAATGTTGTTTTCTGAGCTTGAAAAAGAGCAGCGCATGTCTGAGGGGAAACAGTTCAACTATCAGTGTCGATGTTGTTTTCTTGAGATGAAGGATGACTCCAAAAATGCATTGTCCTTAGAGAATCTGAGTGAGGAATATGTTACTAGCTATGATGATGTGACGCAAATTCTGATTAAG 363 0.4187 EDIFQSVGVPLVRNALAGYNTSILSYGQSGSGKTYTMWGPPSAMFEEHSPQSHKGIVPRIFQMLFSELEKEQRMSEGKQFNYQCRCCFLEMKDDSKNALSLENLSEEYVTSYDDVTQILIK 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52317g00001 121 Gene3D Kinesin motor domain 1 121 IPR036961 -
Trme52317g00001 121 ProSiteProfiles Kinesin motor domain profile. 1 121 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme52317g00001 121 PANTHER KINESIN-LIKE PROTEIN KIN-12D 1 120 IPR044986 -
Trme52317g00001 121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 120 IPR027417 -
Trme52317g00001 121 Pfam Kinesin motor domain 2 91 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52317g00001 Trme-Chr52317 24 874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52317g00001 1 119 Calmodulin-binding Proteins AT5G65930 28.571 1.70e-11 58.2