Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52262g00001 ATGATTGGTGCTATTCCGGCTGCTATGACTTACTATTGGAGAATGAAAATGCCTGAAACTGGTCGTTATACTGCAATCGTAGAAGGGAACGCGAAACAAGCTGCAGCAGACATGGCAAGAGTTTTAGACATTGAAATTATAGCGGAGCAGGATAAGTTGGCTGAGTTTAAAGCCGCGAATAATTACACTCTTGGGTCGCGCGAGTTTTTTGACAGACATGGTCGTCATTTGATTGGTACGATGAGTTGTTGGTTCTTATTAGATATTGCTTTCTACAGTCAGAACTTAACACAAAAAGATATTTACCCTGCAATGGGACTAATTGATAAAGATACCGCCATGAATGCTATTGATGAAGTTTTTCAAACCTCGCGTGCCATGTTTGTTGTCGCCTTGTTTGGAACTTTCCCCGGTTATTGGTTCACCGTTTTCTTCATTGAAAAACTCGGACGACACAAGATCCAACTCATTGGTTTCTTCATGATGTCTTTCTTCATGTTTATTATTGGTGTCAAATATGATTACTTGAGAGACGAAAACAAGAACCTATTCGCTCTTTTATACGGGCTAACATTCTTTTTCGCGAACTTTGGGCCTAATAGTACAACATTTGTCTTGCCGGCTGAGCTGTTTCCAACGCGGGTGAGATCCACCTGTCATGCTCTCAGCGCGGCGGCAGGGAAGGCTGGGGCTATGGTTGGCGCGTTTGGAATACAGTACTACACATTGGACGGTACCACGAAGAAGATTAAAAAAGCAATGATGATTTTGGCCTTCACTAATTTGTTAGGATTCTTCTGCTCGTTCTTGGTCACGGAAACTAAGGGACGATCGTTGGAAGAGATTTCGGGTGAGGATGGGAGAGAGAGTGAACTCACTGCAACACCAAATGATAGGGTTTCT 903 0.4297 MIGAIPAAMTYYWRMKMPETGRYTAIVEGNAKQAAADMARVLDIEIIAEQDKLAEFKAANNYTLGSREFFDRHGRHLIGTMSCWFLLDIAFYSQNLTQKDIYPAMGLIDKDTAMNAIDEVFQTSRAMFVVALFGTFPGYWFTVFFIEKLGRHKIQLIGFFMMSFFMFIIGVKYDYLRDENKNLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGAMVGAFGIQYYTLDGTTKKIKKAMMILAFTNLLGFFCSFLVTETKGRSLEEISGEDGRESELTATPNDRVS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52262g00001 301 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 280 - -
Trme52262g00001 301 Gene3D MFS general substrate transporter like domains 1 299 IPR036259 -
Trme52262g00001 301 MobiDBLite consensus disorder prediction 281 301 - -
Trme52262g00001 301 SUPERFAMILY MFS general substrate transporter 2 283 IPR036259 -
Trme52262g00001 301 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 276 IPR020846 GO:0022857
Trme52262g00001 301 Pfam Sugar (and other) transporter 3 283 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52262g00001 Trme-Chr52262 1 903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52262g00001 1 285 Inorganic Solute Cotransporters AT5G43350 56.229 7.06e-112 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52262g00001 K08176 - gmx:100805284 503.827