Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52236g00001 ATTTTTATGGACTTAACATTCATCAATCTCTCTCATAGTCAATCCGTAACTCAAATTCCTGATTTGTCTGGAGCTAAAAACTTACGAGTGTTTGCAGTTGATAAATGCTATAAACTTGTAAGGTTTGATATATCCATTGGATTTATGCCTAATCTAGTGTATTTAAGTGCCTCAGGATGCACTGAGCTTGAAGGTTTTGTGCCAAAAATGTATCTTCCCTCCCTTCAATTGCTTTCATTTAATTACTGCAAAAAGTTTGAACTCTTCCCACATGTAATGCAAAAGATGGATACACCATTAAAGATTCACATGAGAAATACCGCCATTAAGAAGTTTCCAAAGTCTATTGGCAACCTTACAGGGCTTGAGTTKATAGACATGTCATTTTGCAAAGGGCTGAAAGATCTATCAAGTAACTTCTTATTGCTTCCAAAACTGATCACTATGAAAATTGATGGTTGCTCTCAACTTGGAGAATCATTTCAACGGTTCAAAGAGCGCAATTCAGTGACAAACAACTTCCCAAATTTAGAAGCACTTCATTTTAGCGAGGCTAATCTATCCTATGAAGATGTTAATGCCATTATTGAAATATTTCCAAAACTGAAAGACTTGAAATTATCGCACAATGGGTTTGTAGTCCTCCCAAAGTGCATCAAAGGATCTGTGCACTTGAAAAGTCTTGATGTGAGCTTTTGCAGGAATCTTACAGAAGTTCCAGAACTTCCATTA 732 0.3607 IFMDLTFINLSHSQSVTQIPDLSGAKNLRVFAVDKCYKLVRFDISIGFMPNLVYLSASGCTELEGFVPKMYLPSLQLLSFNYCKKFELFPHVMQKMDTPLKIHMRNTAIKKFPKSIGNLTGLEXIDMSFCKGLKDLSSNFLLLPKLITMKIDGCSQLGESFQRFKERNSVTNNFPNLEALHFSEANLSYEDVNAIIEIFPKLKDLKLSHNGFVVLPKCIKGSVHLKSLDVSFCRNLTEVPELPL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52236g00001 244 Gene3D Ribonuclease Inhibitor 2 101 IPR032675 -
Trme52236g00001 244 Gene3D Ribonuclease Inhibitor 102 243 IPR032675 -
Trme52236g00001 244 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 5 96 - -
Trme52236g00001 244 SUPERFAMILY L domain-like 4 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52236g00001 Trme-Chr52236 208 939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52236g00001 5 164 WRKY Transcription Factor Family AT4G12020 33.125 2.95e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52236g00001 - - tpra:123922065 428.328