Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52217g00001 ATGGAAAGTTTGCAAAAATTCACAAGAGCGGTTACAGGGGCAAATTGGGGACTCTCAGGAAAAGCATTAGATCCAAGAAGCAAGCGCGTGCAAATATGGAACCGCGCGTTGTTATTAGCGCGCGGTGTTGCGTTGGTGATGGATCCACTGTTTGTCTACGCACTGTCCATAGGGAGAGGAGGAGGTTCGCCGTGTTTGTATATGGACGGTGGTTTGGCGTTGGTTGTTACGGTGGCGCGTT 241 0.5062 MESLQKFTRAVTGANWGLSGKALDPRSKRVQIWNRALLLARGVALVMDPLFVYALSIGRGGGSPCLYMDGGLALVVTVAR 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52217g00001 80 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 16 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52217g00001 Trme-Chr52217 1 241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52217g00001 17 80 Ion Channels AT5G15410 73.438 6.12e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52217g00001 K05391 - gmx:100798823 98.5969