Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52151g00001 ATGAATGCTGGAACTTCAAGAGGTAATGCACAAGGTTTCAACTTAAGTGCTCTTACAAAACTTTCTGATGTAAAAAGCACAAATGGAAAAACTAGTTTACTTCACTTCATAGTTGAACAAGTAGTTCATTCAGAAGGGAAAAGAAAAGCTATCTATGAAAAACACAATGATGAAAGTGAAAAAGAATATGTAATTCTTGGTTTACAAGTGCTAAGTGGTCTAAGTAATGAGTTATCAGAAGCAAAAAAAGCAGCTAGCATGCACTATAATAGTTTCATCACTATGTGTTCAACTCTTAGTTCTCATGTTAATGAAATTAGACACATTATAACATGTTGTGGAAACACTAAAGGTGGATTTACCAATGAGATGAAAGGGTTTCTAGAGTTATGTGAGGATGAACTTAAGGTGGTGAAAGAGGAACAAACAAGGATCATGGAACTTGTGAAGAAAACAAATGAGTACTATCTAGCAGGAACATCTAAAGACAATATGTCTAATCCTTTTCATTTGTTTGTTATTGTAAAAGATTTTGTTGACAAGGTTGGTCAAACTTGTATTGAACTAAAAAAGAAGGTAGAAAAGAAGAATGTAGGAATGGAATCTGTATCAACAACACCACCTTTGTCTCCATCAAAGAAGGTGCCACTGAGATTTCGTAGCATTGATTTAAATTTTCTGTCAAATAAGTTAGAGTTAGAGTCTACATTTTCTAGTCAGTCAGAAGATGACTTCTGA 738 0.3333 MNAGTSRGNAQGFNLSALTKLSDVKSTNGKTSLLHFIVEQVVHSEGKRKAIYEKHNDESEKEYVILGLQVLSGLSNELSEAKKAASMHYNSFITMCSTLSSHVNEIRHIITCCGNTKGGFTNEMKGFLELCEDELKVVKEEQTRIMELVKKTNEYYLAGTSKDNMSNPFHLFVIVKDFVDKVGQTCIELKKKVEKKNVGMESVSTTPPLSPSKKVPLRFRSIDLNFLSNKLELESTFSSQSEDDF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52151g00001 245 Gene3D Formin, FH2 domain 1 204 IPR042201 -
Trme52151g00001 245 PANTHER FORMIN-RELATED 1 203 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme52151g00001 245 Pfam Formin Homology 2 Domain 1 181 IPR015425 -
Trme52151g00001 245 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 208 IPR015425 -
Trme52151g00001 245 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52151g00001 Trme-Chr52151 4 741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52151g00001 1 230 FH2 protein (formin) Gene Family AT1G70140 41.339 5.45e-58 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52151g00001 - - tpra:123885767 473.396