Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme520854g00001 ATGTTTGTCCCCAAACTCAAAGGAAATGGTGCCGTAGCCGACGCTATTGCCCTTTTGGGTGCCCTTATCATGCCGCACAATCTTTTCCTCCATTCTGCTTTGGTTCTGTCTAGAAAAATACCTGGTTCTAAGCGCGGCATCAAT 144 0.4722 MFVPKLKGNGAVADAIALLGALIMPHNLFLHSALVLSRKIPGSKRGIN 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme520854g00001 48 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 47 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme520854g00001 48 Pfam Natural resistance-associated macrophage protein 1 40 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme520854g00001 Trme-Chr520854 11 256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme520854g00001 1 47 Inorganic Solute Cotransporters AT1G80830 76.596 6.98e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme520854g00001 K21398 - csin:114288449 87.8113