Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52080g00001 ATGCATTCTTCATCTTCACCCGTTCTTCCCACTCTTATGGAAAGCAAATGTATGAAACCCCCGGATTCTTTTCACTGTTCACCTGTCAGGGGTCTGAATACAAATCCTAGCTCACTGCAAGCTGCATCACTGAATCCGATCAGAAGTATTCGTCCGGTGTTTTCAACCACTGTTGAATGTCCTGGTGGCATCCCTTTTTCTCCCATTTCACAGCATGATAAGCAATATCAAGATTCTCCCTTCGCTTCTCNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTGGGGACCAGATCCAATGCAGGATATTCTTAGTTTTCCTGAAATTTTTTCTGTTCAGCATGATCAGGTGGAAAACGTCGCTGCTTGTTACATGAATGATGACAATGTCAAAAAATCTGATTTTGGGGAATGGGTTGAACAGCTAATGACAATTGATGATACCCTCCACCCAAATTGGAATCAGCTTCTTGGTGATGACAATGCTGCAGAACCAACACCTAAG 552 0.3678 MHSSSSPVLPTLMESKCMKPPDSFHCSPVRGLNTNPSSLQAASLNPIRSIRPVFSTTVECPGGIPFSPISQHDKQYQDSPFASXXXXXXXXXXXXXXXXXXXXXXXXXXXWGPDPMQDILSFPEIFSVQHDQVENVAACYMNDDNVKKSDFGEWVEQLMTIDDTLHPNWNQLLGDDNAAEPTPK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52080g00001 184 MobiDBLite consensus disorder prediction 65 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52080g00001 Trme-Chr52080 36 587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52080g00001 114 181 G2-like Transcription Factor Family AT5G29000 35.211 2.86e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52080g00001 - - mtr:25499705 256.144