Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme52061g00001 ATGATAGAAAGTGCATGTATTACGTTCCTTGCCTGCAGGTATGAATCTGAGCTCATAGAAAAGATTGTTAAAGACACATTCACTAAAGTGGCTCCTGCACCAGTACAAATGAAGCACCTAGTTGGACTTGATACTCGTTTTGAGGATGTGAAATCAGTTTTAGATATTGAGTCTAATGATACCGTTCGAGTGATGGGAATTCACGGAGCTGGTGGAATAGGAAAAACCACATTTGCAGCCTATTTATATGACAAAATTAGGCACCTTTTTGAAGCATCAACTTTTCTTCTTCATGTCAAAGAAGAATCAAACAAAGGCATCAAAGGCCTAGAAGATCTGCAAAAGACACTTTTATCTCAGTTGGGTGAGGATATAGGCACAACGGTTGGAAGCACATTTAAAGGAAGTGTTGAAATCAAACGCAGGCTTGGCAAGAGAAGAGTTCTTCTAGTTTTGGATGACATTGACGACAAAGGAAATTTGAACTTACTGGTTGGAGGACATGATTGGTTTGGTTCCGGTAGTAGGATTATAATAACAACAAGGGATGAAACTGTGCTAGATAATCATGATGTTGAAATTGATAAATATAAAATGGAGGCGTTAAATGATCGCAACTCGCTAGAACTCTTTTGTTGGAATGCCTTTGATAATAACAGACCTGCAGAAAACTTTGAATATAT 683 0.3792 MIESACITFLACRYESELIEKIVKDTFTKVAPAPVQMKHLVGLDTRFEDVKSVLDIESNDTVRVMGIHGAGGIGKTTFAAYLYDKIRHLFEASTFLLHVKEESNKGIKGLEDLQKTLLSQLGEDIGTTVGSTFKGSVEIKRRLGKRRVLLVLDDIDDKGNLNLLVGGHDWFGSGSRIIITTRDETVLDNHDVEIDKYKMEALNDRNSLELFCWNAFDNNRPAENFEY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme52061g00001 227 Gene3D - 18 196 IPR027417 -
Trme52061g00001 227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 225 IPR027417 -
Trme52061g00001 227 PRINTS Disease resistance protein signature 64 79 - -
Trme52061g00001 227 PRINTS Disease resistance protein signature 142 156 - -
Trme52061g00001 227 Pfam NB-ARC domain 46 220 IPR002182 GO:0043531
Trme52061g00001 227 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 221 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme52061g00001 Trme-Chr52061 8 690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme52061g00001 13 187 WRKY Transcription Factor Family AT4G12020 33.714 3.26e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme52061g00001 - - tpra:123920929 387.497