Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme520131g00001 GAAAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAATCAAGCAAAAGTTTCCCAATTTCAGTCCTGCTGCCATTGGATCTTCACTTTCCACCACGGCATCTCTGAATGACAACAGTGGGAAGCCAATAATGGCTCAGCGGACATATCCCTCCCCGGACCTAAACAAATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTAAATGCTACGGCAGCATTAAACCCGGGATTGCTTTTCGATTC 278 0.4712 ENFAMMSGTSMAAPHVAGLAALIKQKFPNFSPAAIGSSLSTTASLNDNSGKPIMAQRTYPSPDLNKSPATPFDMGSGFVNATAALNPGLLFDS 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme520131g00001 93 ProSitePatterns Serine proteases, subtilase family, serine active site. 8 18 IPR023828 -
Trme520131g00001 93 Pfam Subtilase family 2 48 IPR000209 GO:0006508|GO:0008236
Trme520131g00001 93 SUPERFAMILY Subtilisin-like 2 86 IPR036852 GO:0004252|GO:0006508
Trme520131g00001 93 ProSiteProfiles Serine proteases, subtilase domain profile. 1 85 - -
Trme520131g00001 93 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 92 IPR045051 -
Trme520131g00001 93 Gene3D Peptidase S8/S53 domain 2 92 IPR036852 GO:0004252|GO:0006508
Trme520131g00001 93 MobiDBLite consensus disorder prediction 46 65 - -
Trme520131g00001 93 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme520131g00001 Trme-Chr520131 1 278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme520131g00001 1 92 Subtilisin-like Serine Gene Family AT1G30600 76.087 3.01e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme520131g00001 - - tpra:123914546 181.03