Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme518g00001 CAAGTGACAAAGGAAGGAGATATATATAGTTTTGGGATAGTTTTGTTGGAGATATTGACAGGGAGGAAAGCTGTGATGTTTACACAAGATGAAGATATAGTGAAGTGGGTTAAGAAACAGTTACAAAAAGGTTTGATTTCTGAGTTGTTGGAACCTGGTTTGCTTGAGATTGATCAAGAATCATCAGAATGGGAAGAGTTTTTGTTGGGTGTTAAAGTTGCACTTCTTTGCACAGCACATGATCCTCTTGATAGACCTTCTATTAATGATATTGTTTTCATGCTTGAAGGTTGTCGTGTTGGACCTGATATCCCTTCTTCTGCTGATCCAACCACACTACCTTCACCTGTTTCTTGA 357 0.3838 QVTKEGDIYSFGIVLLEILTGRKAVMFTQDEDIVKWVKKQLQKGLISELLEPGLLEIDQESSEWEEFLLGVKVALLCTAHDPLDRPSINDIVFMLEGCRVGPDIPSSADPTTLPSPVS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme518g00001 118 SUPERFAMILY Protein kinase-like (PK-like) 2 112 IPR011009 -
Trme518g00001 118 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
Trme518g00001 118 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme518g00001 Trme-Chr518 2 358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme518g00001 1 116 Receptor kinase-like Gene Family AT4G36180 80.172 1.67e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trme518g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme518g00001 - - cpap:110808508 216.468