Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme51889g00001 ACAGGAGTTGCTACTGCTTTTGCTGCCAGAGATGTACTTGGCAATGTGTTCAGTGGTTTATCAATGCAGTTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGATCGATAGAGGGTCAAGTGGTGGAGATTGGTCTTACTAGCACATCATTGCTGAGTCCAGAGAAGTTCCCAGTCATTGTGCCGAACTCATTTTTTTCTAGCCAGGTAAGCCTTCCTTTTCCCCCCCTTCCTGCAGTCCCTTCAGCGAAGTAG 261 0.4559 TGVATAFAARDVLGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEIGLTSTSLLSPEKFPVIVPNSFFSSQVSLPFPPLPAVPSAK 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme51889g00001 86 SUPERFAMILY Sm-like ribonucleoproteins 11 71 IPR010920 -
Trme51889g00001 86 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 2 72 - -
Trme51889g00001 86 Pfam Mechanosensitive ion channel 1 70 IPR006685 GO:0016020|GO:0055085
Trme51889g00001 86 Gene3D - 27 73 IPR023408 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme51889g00001 2 72 Mechanosensitive Ion Channel Family AT4G00290 83.099 3.24e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme51889g00001 K22047 - gmx:100789047 132.494